Research interests: Systems Biology modeling, (Bio)Process Systems Engineering, Big Data Analytics, Computational Modelling, Bioinformatics and Systems Biotechnology.
Representative Publications
Enrichment analysis on regulatory subspaces: a novel direction for the superior description of cellular responses to SARS-CoV-2
10.1016/j.compbiomed.2022.105443
IPOscore: an interactive web-based platform for postoperative surgical complications analysis and prediction in the oncology domain
10.1016/j.cmpb.2022.106754
A General Hybrid Modeling Framework for Systems Biology Applications: Combining Mechanistic Knowledge with Deep Neural Networks under the SBML Standard
10.3390/ai4010014
Predicting metabolic fluxes from omics data via machine learning: Moving from knowledge-driven towards data-driven approaches
10.1016/j.csbj.2023.10.002
Hybrid deep modeling of a CHO-K1 fed-batch process: combining First-Principles with deep neural networks
10.3389/fbioe.2023.1237963
Pattern-centric transformation of omics data grounded on discriminative gene associations aids predictive tasks in TCGA while ensuring interpretability
10.1002/bit.28758
Bottlenecks in advancing and applying multiomic data integration-common data resources as rate-limiting drivers-the high-impact use case of atherosclerotic cardiovascular disease
10.1093/bib/bbaf526
Strain Engineering, Flux Design, and Metabolic Production Using Big Data: Ongoing Advances and Opportunities
10.1002/9783527850532
